Opuscoli e pubblicazioni scaricabili


Pubblicazioni

2013

  • Kasymbekov J, Imanseitov J, Ballif M, Schürch N, Paniga S, et al. (2013) Molecular Epidemiology and Antibiotic Susceptibility of Livestock Brucella melitensis Isolates from Naryn Oblast, Kyrgyzstan. PLoS Negl Trop Dis 7(2): e2047. doi:10.1371/journal.pntd.0002047
  • Storelli N., Peduzzi S., Saad M., Frigaard N-U., Perret X., Tonolla M. (2013) CO2 assimilation in the chemocline of Lake Cadagno is dominated by a few types of phototrophic purple sulfur bacteria.  FEMS Microbiology Ecology (accepted for publication).
  • Guidi V., Lehner A., Lüthy P and Tonolla M. (2013) Dynamics of Bacillus thuringiensis var. israelensis and Lysinibacillus sphaericus spores in urban catch basins after simultaneous application against mosquito larvae. PLOS ONE (accepted for publication)

2012

  • Benagli C, Demarta A, Caminada A, Ziegler D, Petrini O, and Tonolla M. (2012) A Rapid MALDI-TOF MS Identification Database at Genospecies Level for Clinical and Environmental Aeromonas Strains. PLoS ONE 7(10): e48441. doi:10.1371/journal.pone.0048441
  • Andrés-Barrao C., Chappuis M., Benagli C., Tonolla M., Ortega-Pérez R., and Barja F. (2012) Rapid identification and classification of acetic acid bacteria using MALDI-TOF mass spectrometry fingerprinting. Systematic and Applied Microbiology (Accepted for publication).
  • Ziegler D., Mariotti A., Pflüger V., Saad M., Vogel G., Tonolla M. and Perret X. (2012) In situ identification of plant-invasive bacteria with MALDI-TOF mass spectrometry. PLoS ONE 7(5):e37189. PMID: 22615938.
  • Riccardi N., Lucini L., Benagli C., Welker M., Wicht B., and Tonolla M. (2012) Potential of matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (MALDI-TOF MS) for the identification of freshwater zooplankton: a pilot study with three Eudiaptomus (Copepoda: Diaptomidae) species
  • J. Plankton Res. 34: 484-492. doi:10.1093/plankt/fbs022
  • Wicht B., Petrini O., Jermini M., Gessler C., Broggini G., 2012. Molecular, proteomic and morphological characterization of the ascomycete Guignardia bidwellii, agent of grape black rot: a polyphasic approach to fungal identification. Mycologia 104(5): 1036-1045.
  • Ravasi, D. F., Peduzzi, S., Guidi, V., Peduzzi, R., Wirth, S. B., Gilli, A. and Tonolla M. (2012), Development of a real-time PCR method for the detection of fossil 16S rDNA fragments of phototrophic sulfur bacteria in the sediments of Lake Cadagno. Geobiology 10:196-204. doi: 10.1111/j.1472-4669.2012.00326.x
  • Peduzzi S, Storelli N, Welsh A, Peduzzi R, Hahn D, Perret X, Tonolla M. (2012) Candidatus "Thiodictyon syntrophicum", sp. nov., a new purple sulfur bacterium isolated from the chemocline of Lake Cadagno forming aggregates and specific associations with Desulfocapsa sp. Syst Appl Microbiol. 35: 139-144. doi: 10.1016/j.syapm.2012.01.001
  • Volta P., Riccardi R., Lauceri R., Tonolla M. (2012) Discrimination of freshwater fish species by Matrix-Assisted Laser Desorption/Ionization- Time Of Flight Mass Spectrometry (MALDI-TOF MS): a pilot study. Journal of Limnology. 71: 164-169.
  • Romano V, Pasquale V, Krovacek K, Mauri F, Demarta A, Dumontet S. (2012) Toxigenic Clostridium difficile PCR ribotypes from wastewater treatment plants in southern Switzerland. Appl. Environ. Microbiol. 78: 6643-6646. doi: 10.1128/AEM.01379-12

2011

  • Stephan R, Cernela N, Ziegler D, Pflüger V, Tonolla M, Ravasi D, Fredriksson-Ahomaa M, Hächler H. Rapid species specific identification and subtyping of Yersinia enterocolitica by MALDI-TOF mass spectrometry. J Microbiol Methods 2011, 87(2): 150-3.
  • Rezzonico F, Stockwell VO, Tonolla M, Duffy B, Smits THM. Pantoea clinical isolates cannot be accurately assigned to species based on metabolic profiling. Transpl Infect Dis 2011: 1-2.
  • Schüpbach J, Bisset LR, Regenass S, Bürgisser P, Gorgievski M, Steffen I, Andreutti C, Martinetti G, Shah C, Yerly S, Klimkait T, Gebhardt M, Schöni-Affolter F, Rickenbach M. High specificity of line-immunoassay based algorithms for recent HIV-1 infection independent of viral subtype and stage of disease. BMC INfectious Diseases 2011, 11:254. doi: 10.1186/1471-2334-11-254
  • Schubert CJ, Vazquez F, Lösekann-Behrens, Knittel K, Tonolla M, Boetius Antje. Evidence for anaerobic oxidation of methane in sediments of a freshwater system (Lago di Cadagno). FEMS Microbiol Ecol (2011) 1-13.
  • Stephan R, Cernela N, Ziegler D, Pflüger V, Tonolla M, Ravasi D, Fredriksson-Ahomaa M, Hächler H. Rapid species specific identification and subtyping of Yersinia enterocolitica by MALDI-TOF Mass spectrometry. Journal of Microbiological Methods (2011), doi: 10.1016/j.mimet.2011.08.016
  • Gandolfi-Decristophoris P, De Benedetti A,  Petignat C, Attinger M, Guillaume J, Fiebig L, Hattendorf J, Cernela N, Regula G, Petrini O, Zinsstag J and Schelling. Evaluation of pet contact as a risk factor for carriage of multidrug-resistant staphylococci in nursing home residents. American Journal of Infection Control (2011), doi:10.1016/j.ajic.2011.04.007
  • Roger S, Cernela N, Ziegler D, Pflüger V, Tonolla M, Ravasi D, Fredriksson-Ahomaa M, Hächler H. Rapid species specific identification and subtyping of Yersinia enterocolitica by MALDI-TOF Mass spectrometry. Journal of Microbiological Methods (2011), doi: 10.1016/j.mimet.2011.08.016
  • Schubert CJ, Vazquez F, Lösekann-Behrens, Knittel K, Tonolla M, Boetius Antje. Evidence for anaerobic oxidation of methane in sediments of a freshwater system (Lago di Cadagno). FEMS Microbiol Ecol (2011) 1-13.
  • Guidi V, Patocchi N, Lüthy P, Tonolla M. Distribution of Bacillus thuringensis subsp. israelensis in Soil of a Swiss Wetland reserve after 22 years of Mosquito Control. Applied and Environmental Microbiology (2011) vol. 77 (1): 3663-3668.
  • Decristophoris P, De Benedetti A , Marvin G , Guillaume J , Petignat C , Attinger M,  Petrini O. Epidemiologia degli stafilococchi multiresistenti agli antibiotici nei gatti, nei cani e nei residenti di istituti di lunga degenza in Svizzera. Rapporto di studio 2011.
  • Pertel T. et al. TRIM5 is an innate immune sensor for the retrovirus capsid lattice. Nature 2011 vol. 472 (7343) pp. 361-36.
  • Decristophoris P, Fasola A, Benagli C, Tonolla M, Petrini O. Identification of Staphylococcus intermedius Group by MALDI-TOF MS. Systematic and Applied Microbiology 2011 34: 45-51.
  • Benagli C, Rossi V, Dolina M, Tonolla M, Petrini O. Matrix-assisted laser desorption ionization-time of flight mass spectrometry for the identification of clinically relevant bacteria .PLoS One.  2011 Jan 25;6(1):e16424.
  • Gaia V, Casati S, Tonolla M. Rapid identification of Legionella spp. by MALDI-TOF MS based protein mass fingerprinting. Syst Appl Microbiol. 2011; 34: 40-44.
  • Schubert CJ, Vazquez F, Lösekann-Behrens T, Knittel K, Tonolla M, Boetius A. Evidence for anaerobic oxidation of methane in sediments of  a freshwater system (Lago di Cadagno). FEMS Microbiol Ecol. 2011 Jan 11. doi: 10.1111/j.1574-6941.2010.01036.x
  • Hahn D, Mirza B, Benagli C, Vogel G, Tonolla M. Typing of nitrogen-fixing Frankia strains by matrix-assisted laser desorption ionization-time-of-flight (MALDI-TOF) mass spectrometry. Syst Appl Microbiol. 2011; 34:63-68.
  • Haller L, Tonolla M, Zopfi J, Peduzzi R, Wildi W, Poté J. Composition of bacterial and archaeal communities in freshwater sediments with different contamination levels (Lake Geneva, Switzerland). Water Res. 2011 Jan;45(3):1213-28.
  • Habicht KS, Miller M, Cox RP, Frigaard NU, Tonolla M, Peduzzi S, Falkenby LG, Andersen JS. Comparative proteomics and activity of a green sulfur bacterium through the water column of Lake Cadagno, Switzerland. Environ Microbiol. 2011; 13(1):203-15.
  • Lee JV, Lai S, Exner M, Lenz J, Gaia V, Casati S, Hartemann P, Lück C, Pangon B, Ricci ML, Scaturro M, Fontana S, Sabria M, Sánchez I, Assaf S, Surman-Lee S. An international trial of quantitative PCR for monitoring for Legionella in artificial water systems. J Appl Microbiol. 2011 Jan 29. doi: 10.1111/j.1365-2672.2011.04957.x.


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    2010

    • Peduzzi S, Welsh A, Demarta A, Decristophoris P. Peduzzi R, Hahn D, Tonolla M. 2010. Thiocystis chemoclinalis sp. nov. and Thiocystis cadagnonensis sp. nov., two new motile purple sulfur bacteria isolated from chemocline of meromictic lake Cadagno, Switzerland. Int J Syst Evol Microbiol. ijs.0.010397-0
    • Ndiaye M.L., Niang1 S., Pfeifer H.-R., Peduzzi R., Tonolla M. and Dieng Y. (2010) Effect of irrigation water and processing on the microbial quality of lettuces produced and sold on markets in Dakar (senegal). Irrigation and Drainage. Published online in Wiley Online Library (wileyonlinelibrary.com) DOI: 10.1002/ird.590.
    • Ndiaye M. L., Pfeifer H.-R., Niang S., Dieng Y., Tonolla M., Peduzzi R. (2010) Impacts de l'utilisation des eaux polluées en agriculture urbaine sur la qualité de la nappe de Dakar (Sénégal). Vertigo (revue électronique en sciences de l'environnement, vertigo.revues.org )  10 (2) : 1-16.
    • Habicht KS, Miller M, Cox RP, Frigaard NU, Tonolla M, Peduzzi S, Falkenby LG, Andersen JS. 2010. Comparative proteomics and activity of a green sulfur bacterium through the water column of Lake Cadagno, Switzerland. Environ Microbiol. 2010 Aug 20. 0 DOI: 10.1111/j.1462-2920.2010.02321.x
    • Cenci RM, Cocchi L, Petrini O, Sena F, Siniscalco C, Vescovi L. 2010. Elementi chimici nei funghi superiori (Chemical elements in fungi). 22010 – 232 pp– EUR 24415 IT– EUR – Scientific and Technical Research series – ISSN 1018-5593 - ISBN 978-92-79-16023-3.
    • Casati S., Conza L., Gaia V. 2010. Malattia del Legionario o malattia del giardiniere? Bollettino della Società ticinese di scienze naturali. Voume 98: 71-74.
    • Casati S, Conza L, Bruin J, Gaia V. 2009. Compost facilities as a reservoir of Legionella pneumophila and Legionella species. Clinical Microbiology and Infection 16(7): 945-7.
    • The Swiss HIV cohort study. 2010. Cohort profile: the Swiss HIV cohort study. Int J Epidemiol 39: 1179-89. doi:10.1093/ije/dyp321.
    • Chaignat V, Schwermer H, Casati S, Planzer J, Worwa G, Vanzetti T, Batten C, Hofmann M, Thür B. 2010. Occurence and spatial distribution of Toggenburg Orbivirus in Switzerland. Small Ruminant Research DOI: 10.1016/j.smallrumres.2010.05.016
    • Petrini O, Limoni C. 2010. Sensibilità e specificità: ovvero la verifica statistica di un nuovo metodo diagnostico. Tribuna Medica Ticinese 75: 241-242.
    • Strambio-De-Castillia C, Niepel M, Rout MP. 2010. The nuclear pore complex: bridging nuclear transport and gene regulation. Nature Reviews Molecular Cell Biology 11: 490-501.
    • Tonolla M, Benagli C, Rossi V, Fragoso C, Petrini O. 2010. MALDI-TOF MS: a new laboratory option for the diagnosis of clinical infections. Pipette Swiss Laboratory Medicine 3: 6-10.
    • Guidi V, De Respinis S, Benagli C, Lüthi P, Tonolla M. 2010. A real-time PCR method to quantify spores carrying the Bacillus thuringiensis var. israelensis cry4Aa and cry4Ba genes in soil. Journal of Applied Microbiology. DOI: 10.1111/j.1365-2672.2010.04741.x
    • Rezzonico F, Vogel G, Duffy B, Tonolla M. 2010. Whole Cell MALDI-TOF Mass Spectrometry Application for rapid identification and clustering analysis of Pantoea species. Appl. Environ. Microbiol. 76(13): 4497-509.
    • Samuels GJ, Ismaiel A, Bon M-C, De Respinis S, Petrini O. 2010. Trichoderma asperellum sensu lato consists of two cryptic species. Mycologia 102(4): 944-966.
    • Wicht B, Ruggeri-Bernardi N, Tetsuya Y, Minoru N, Peduzzi R, Akira I. 2010. Inter- and intra-specific characterization of tapeworms of the genus Diphyllobothrium (Cestoda: Diphyllobothriidea) from Switzerland, using nuclear and mitochondrial DNA targets. Parasitology International 59: 35-36.
    • De Respinis S, Vogel G, Benagli C, Tonolla M, Petrini O, Samuels GJ. 2010. MALDI-TOF MS of Trichoderma: a model system for the identification of microfungi. Mycol Progress 9: 79-100.

    2009

    • Gregersen LH, Habicht KS, Peduzzi S, Tonolla M, Canfield DE, Miller M, Raymond P, Cox RP, Frigaard NU. 2009. Dominance of a clonal green sulfur bacterial population in a stratified lake. FEMS Microbiology Ecology 70(1): 30-41.
    • Neagu MR, Ziegler P, Pertel T, Strambio-De-Castillia C, Grütter C, Martinetti G, Mazzucchelli L, Grütter M, Manz MG, Luban J. 2009. Potent inhibition of HIV-1 by TRIM5-cyclophilin fusion proteins engineered from human components. Journal of Clinical Investigation 119 (10): 3035-47.
    • Cima P. 2009. Tipizzazione molecolare di Clostridium difficile. Lavoro di diploma SSTM.
    • Jovic S. 2009. Confronto tra quattro terreni selettivi per l'identificazione rapida presuntiva di Enterobatteriaceae produttrici di enzimi ESBL. Lavoro di diploma SSTM.
    • Golschmidt-Clermont E, Hochwartner O, Demarta A, Caminada AP, Frey J. 2009. Dis. Aquat. Org. 86(1):81-86.
    • Perrin M. 2009. Francisella spp. in ticks. Faculté de Vetsuisse, Université de Bern. Thèse.
    • Fasola A. 2009. Discrimination of Staphylococcus intermedius group isolates. Faculté des sciences. Maîtrise universitaire en pharmacie. Université de Genève.
    • Tonolla M, Benagli C, De Respinis S, Gaia V, Petrini O. 2009. Mass spectrometry in the diagnostic laboratory. Pipette 3: 20-25.
    • Wicht B, Gustinelli A, Fioravanti ML, Invernizzi S, Peduzzi R. 2009. Prevalence of the broad tapeworm Diphyllobothriumlatum in perch (Perca fluviatilis) and analysis of abiotic factors influencing its occurence in Lake Lario (Como, Italy). Bull. Eur. Ass. Fish Pathol 29(2): 58-65.
    • Wicht B, Peduzzi R. 2009. Difillobotriosi (Botriocefalosi): attualità di una zoonosi in risorgenza. Tribuna Medica Ticinese 74: 187-191.
    • Casati S, Racloz V, Delécolle JC, Kuhn M, Mathis A, Griot C, Stäark KDC, Vanzetti T. 2009. An investigation on the Culicoides species composition  at seven sites in southern Switzerland. Medical and Veterinary Entomology 23: 93-98.
    • Casati S, Gioria-Martinoni A, Gaia V. 2009. Commercial potting soils as an alternative infection source of Legionella pneumophila and other Legionella species in Switzerland. Clinical Microbiology and Infection 15(6): 571-5.
    • Halm H, Musat N, Lam P, Langlois R, Musat F, Peduzzi S, Lavik G, Schubert C, Singha B, LaRoche J, Kuypers M. 2009. Co-occurence of denitrification and nitrogen fixation in a meromictic lake, Lake Cadagno (Switzerland). Environmental Microbiology 11(8): 1945-1958.
    • Wicht B, Limoni C, Peduzzi R, Petrini O. 2009. Diphyllobothrium latum (Cestoda: Diphyllobothriidea) in perch (Perca fluviatilis) in three sub-alpine lakes: influence of biotic and abiotic factors on prevalence. Journal of Limnology 68(2): 1-7.
    • Petrini O, Cocchi L, Vescovi L, Petrini L. 2009. Chemical elements in mushrooms: their potential taxonomic significance. Mycological Progress 8(3): 171-180.
    • Gaia V, De Benedetti A, Valsangiacomo C, Poloni C. 2009. Prevalenza di Staphylococcus aureus meticillino-resistente (MRSA) negli istituti a lunga degenza in canton Ticino: studio multicentrico  2008. Tribuna Medica Ticinese 74: 103-106.
    • Decristophoris P, Peduzzi S, Ruggeri-Bernardi N, Hahn D, Tonolla M. 2009. Fine scale analysis of shifts in bacterial community structure in the chemocline of meromictic Lake Cadagno, Switzerland. Journal of Limnology 68(1): 16-24.
    • Wicht B. 2009. Ecology, epidemiology and molecular identification of the genus Diphyllobothrium Cobbold, 1858 in the sub-alpine lakes region. Département de botanique et de biologie végétale, pp 234, Université de Genève.
    • Casati S, Franciolli M. Borreliosi di Lyme in Ticino: vettore, epidemiologia e diagnostica. Tribuna Medica Ticinese 1: 11-15.
    • Scholz T, Garcia HH, Kuchta R, Wicht B. 2009. Update on the human broad tapeworm (Genus Diphyllobotrium), including clinical relevance. Clinical Microbiology Reviews 22(1): 146-160.

     

    2008

    • Wicht B, Scholz T, Peduzzi R, Kuchta R. 2008. First record of human infection with Japanese broad tapeworm Diphyllobotrium nihonkaiense in North America. American Journal of Tropical Medicine and Hygiene 78(2):235-238.
    • Musat N, Halm H, Winterholler B, Hoppe P, Peduzzi S, Hillion F, Horreard F, Amann R, Jorgensen BB, Kruypers MM, 2008. A single-cell view on the ecophysiology of anaerobic phototrophic bacteria. Proc Natl Acad Sci USA 105(46): 17861-17866.
    • Picão RC, Poirel L, Demarta A, Silva CS, , Corvaglia AR, Petrini O, Nordmann P., 2008. Plasmid-mediated quinolone resistance in Aeromonas allosaccharophila recovered from Swiss lake. Journal of Antimicrobial Chemotherapy 62(5): 948-50.
    • Picão RC, Poirel L, Demarta A, Petrini O, Corvaglia AR, Nordmann P., 2008. Occurrence of expanded-spectrum {beta}-lactamase PER-1 in environmental Aeromonas media recovered from Switzerland. Antimicrob Agents Chemother 52(9): 3461-2.
    • Demarta A, Küpfer M, Riegel P, Harf-Monteil C, Tonolla M, Peduzzi R, Monera A, José Saavedra M, Martínez-Murcia A., 2008. Aeromonas tecta sp. nov., isolated from clinical and environmental sources. Syst Appl Microbiol 31(4): 278-86.
    • Grasselli E, François P, Gutacker M, Gettler B, Benagli C, Convert M, Boerlin P, Schrenzel J, Piffaretti JC., 2008.
      Evidence of horizontal gene transfer between human and animal commensal Escherichia coli strains identified by microarray. FEMS Immunol Med Microbiol 53(3): 351-8.
    • Gaia V., Dolina M., Bernasconi E., Petrini O., 2008. Infezioni delle vie urinarie da E. coli: insorgenza di resistenze ad antibiotici nella svizzera italiana durante il periodo 1998-2007. Tribuna Medica 73, 287-289.
    • Sepe, A., Barbieri, P.,Peduzzi, R., Demarta, A., 2008. Evaluation of recA sequencing for the classification of Aeromonas strains at the genotype level. Lett Appl Microbiol 46, 439-444.
    • Casati, S., Bernasconi, M.V., Gern, L., Piffaretti, J.-C., 2008. Assessment of intraspecific mtDNA variability of European Ixodes ricinus sensu stricto (Acari: Ixodidae). Inf. Gen. Evolution 8, 152-158.
    • Wicht, B., de Marval, F., Gottstein, B., Peduzzi, R., 2008. Imported diphyllobothriasis in Switzerland: molecular evidence of Diphyllobothrium dendriticum (Nitsch, 1824). Parasitol Res 102, 201-204.

    2007

    • Benagli, C., Gaia, V., Peduzzi, R. 2007. Legionelle e torri aerorefrigeranti (TAR). Lega Polmonare Ticinese: Novantaduesimo Rapporto e Rendiconto 2006, 16-22.
    • Bossi-Kupfer, M., Genini, A., Peduzzi, R., Demarta, A., 2007. Tracheobronchitis caused by Aeromonas veronii biovar sobria after near-drowning. J Med Microbiol 56, 1563-1564.
    • Decristophoris, P. 2007. Proliferation of new phototrophic sulfur bacteria in the chemocline of meromictic Lake Cadagno: which consequences? Diplôme d'études approfondies en parasitologie et microbiologie. Université de Genève.
    • Ratzow, S., Gaia, V., Helbig, J.H., Fry, N.K., Luck, P.C., 2007. Addition of neuA, the gene encoding N-acylneuraminate cytidylyl transferase, increases the discriminatory ability of the consensus sequence-based scheme for typing Legionella pneumophila serogroup 1 strains. J Clin Microbiol 45, 1965-1968.
    • Schüpbach J, Gebhardt MD, Tomasik Z, Niederhauser C, Yerly S, Bürgisser P, Matter L, Gorgievski M, Dubs R, Schultze D, Steffen I, Andreutti C, Martinetti G, Güntert B, Staub R, Daneel S, Vernazza P. 2007. Assessment of Recent HIV-1 Infection by a Line Immunoassay for HIV-1/2 Confirmation. PLoS Med.  Dec 1; 4(12):e343.
    • Wicht, B. 2007. Monitorage et génotypage de Diphyllobothrium latum dans le Lac Majeur et d'autres lacs suisses. Diplôme d'études approfondies en parasitologie et microbiologie. Université de Genève.
    • Wicht, B., de Marval, F., Peduzzi, R., 2007. Diphyllobothrium nihonkaiense (Yamane et al., 1986) in Switzerland: first molecular evidence and case reports. Parasitol Int 56, 195-199.